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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs10177008 chr2:132262229 A/G LOC150776 chr2:132250386-132279149:+ 0.61 8.19 6.28E-11 Box Plot
ACC rs1019097 chr7:76046184 C/T UPK3B chr7:76139745-76145838:+ 0.73 6.43 3.98E-8 Box Plot
ACC rs1019503 chr5:96254817 G/A ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs10213689 chr5:112744099 T/C APC chr5:112043195-112181936:+ 0.89 5.21 3.25E-6 Box Plot
ACC rs10213826 chr5:112736865 C/T APC chr5:112043195-112181936:+ 0.89 5.21 3.25E-6 Box Plot
ACC rs10214965 chr7:64738517 T/C INTS4L1 chr7:64601603-64694600:+ 0.65 5.08 5.18E-6 Box Plot
ACC rs10214971 chr7:64738754 T/C INTS4L1 chr7:64601603-64694600:+ 0.65 5.08 5.18E-6 Box Plot
ACC rs10223280 chr5:112838246 A/C APC chr5:112043195-112181936:+ 0.88 5.11 4.61E-6 Box Plot
ACC rs10224066 chr7:76004709 A/G UPK3B chr7:76139745-76145838:+ 0.71 5.48 1.27E-6 Box Plot
ACC rs10228441 chr7:76032291 G/C UPK3B chr7:76139745-76145838:+ 0.74 5.9 2.8E-7 Box Plot
ACC rs10229485 chr7:64518873 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs10231956 chr7:64762394 G/A INTS4L1 chr7:64601603-64694600:+ 0.65 5.08 5.18E-6 Box Plot
ACC rs10235405 chr7:76039182 G/A UPK3B chr7:76139745-76145838:+ 0.67 5.23 3.08E-6 Box Plot
ACC rs10237324 chr7:76305519 G/A POMZP3 chr7:76239303-76256578:- 0.97 5.93 2.47E-7 Box Plot
ACC rs10237971 chr7:64508481 G/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot